Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | EEJ33_08005 | Not Available | + | 1707262 - 1708035 | 28969.8 |
| chemotaxis signal transduction protein chev | EEJ33_08010 | Not Available | + | 1708054 - 1709040 | 36791.5 |
| hypothetical protein | EEJ33_08015 | Not Available | + | 1709174 - 1709977 | 30763.3 |
| duf2726 domain-containing protein | EEJ33_08025 | Not Available | + | 1710094 - 1710783 | 26295.0 |
| ggdef domain-containing protein | EEJ33_08030 | Not Available | - | 1710786 - 1711844 | 40464.1 |
| Trna-val | Not Available | Not Available | + | 1712116 - 1712192 | Not Available |
| Trna-val | Not Available | Not Available | + | 1712214 - 1712290 | Not Available |
| abc transporter substrate-binding protein | EEJ33_08045 | Not Available | - | 1712455 - 1713279 | 31414.7 |
| mfs transporter | EEJ33_08050 | Not Available | + | 1713428 - 1714861 | 50811.6 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | EEJ33_08055 | Not Available | + | 1715283 - 1716347 | 41028.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


