Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis/stability protein pilw | EEJ33_07955 | Not Available | - | 1697065 - 1697778 | 26623.6 |
| homoserine o-succinyltransferase | EEJ33_07960 | Not Available | - | 1697987 - 1698928 | 36200.9 |
| atp-binding protein | EEJ33_07965 | Not Available | + | 1698994 - 1699443 | 17487.9 |
| abc transporter permease | EEJ33_07970 | Not Available | - | 1699448 - 1700596 | 42124.1 |
| abc transporter permease | EEJ33_07975 | Not Available | - | 1700593 - 1701756 | 43563.8 |
| hlyd family secretion protein | EEJ33_07980 | Not Available | - | 1701760 - 1702734 | 35769.4 |
| tolc family protein | EEJ33_07985 | Not Available | - | 1702746 - 1704164 | 51568.3 |
| hypothetical protein | EEJ33_07990 | Not Available | - | 1704332 - 1704565 | 9071.95 |
| sensor histidine kinase | EEJ33_07995 | Not Available | + | 1704894 - 1706510 | 59928.0 |
| response regulator | EEJ33_08000 | Not Available | + | 1706510 - 1707196 | 25823.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


