Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | EEJ33_07900 | Not Available | - | 1672850 - 1673488 | 23459.5 |
| agglutination protein | EEJ33_07905 | Not Available | - | 1673490 - 1674827 | 49345.8 |
| ig-like domain-containing protein | EEJ33_07910 | Not Available | + | 1675224 - 1691588 | 561193.0 |
| duf1415 domain-containing protein | EEJ33_07915 | Not Available | - | 1691697 - 1692245 | 21372.1 |
| mfs transporter | EEJ33_07920 | Not Available | - | 1692302 - 1693519 | 44102.2 |
| lysr family transcriptional regulator | EEJ33_07925 | Not Available | + | 1693604 - 1694494 | 33906.4 |
| glutaredoxin family protein | EEJ33_07930 | Not Available | - | 1694525 - 1694758 | 9029.13 |
| m48 family peptidase | EEJ33_07935 | Not Available | + | 1695041 - 1695553 | 19893.4 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | EEJ33_07940 | Not Available | + | 1695550 - 1696626 | 39979.4 |
| hypothetical protein | EEJ33_07950 | Not Available | + | 1696837 - 1697061 | 8952.33 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


