Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2913 family protein | EEJ33_07845 | Not Available | + | 1657015 - 1657752 | 27547.8 |
| duf2867 domain-containing protein | EEJ33_07850 | Not Available | - | 1657856 - 1659292 | 53966.5 |
| mate family efflux transporter | EEJ33_07855 | Not Available | + | 1659420 - 1660796 | 49648.1 |
| abc transporter atp-binding protein | EEJ33_07860 | Not Available | + | 1660922 - 1661593 | 24728.9 |
| abc transporter permease | EEJ33_07865 | Not Available | + | 1661517 - 1664027 | 92700.6 |
| hydroxyneurosporene synthase | EEJ33_07870 | Not Available | + | 1664028 - 1665146 | 42697.3 |
| na+/h+ antiporter nhaa | EEJ33_07875 | Not Available | + | 1665425 - 1666573 | 40298.8 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EEJ33_07885 | Not Available | + | 1667170 - 1670055 | 104879.0 |
| saccharopine dehydrogenase family protein | EEJ33_07890 | Not Available | + | 1670069 - 1671313 | 45960.0 |
| carboxynorspermidine decarboxylase | EEJ33_07895 | Not Available | + | 1671549 - 1672712 | 43013.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


