Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EEJ33_07745 | Not Available | + | 1628712 - 1632242 | 132883.0 |
| eal domain-containing protein | EEJ33_07750 | Not Available | + | 1632247 - 1634001 | 65393.4 |
| response regulator | EEJ33_07755 | Not Available | + | 1634013 - 1635674 | 63931.0 |
| collagenase | EEJ33_07760 | Not Available | - | 1635708 - 1638125 | 91597.9 |
| serine protease | EEJ33_07765 | Not Available | + | 1638453 - 1640075 | 59024.5 |
| sgrr family transcriptional regulator | EEJ33_07770 | Not Available | - | 1640157 - 1641920 | 66816.0 |
| hypothetical protein | EEJ33_07775 | Not Available | + | 1642111 - 1642314 | 7585.12 |
| cholix toxin | EEJ33_07780 | Not Available | + | 1642863 - 1644770 | 70495.5 |
| duf3103 family protein | EEJ33_07785 | Not Available | - | 1644838 - 1646028 | 43954.6 |
| methyl-accepting chemotaxis protein | EEJ33_07790 | Not Available | - | 1646416 - 1648206 | 64856.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


