Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | EEJ33_07695 | Not Available | - | 1618453 - 1619073 | 22549.6 |
| atp-binding cassette domain-containing protein | EEJ33_07700 | Not Available | - | 1619066 - 1619728 | 24564.8 |
| abc transporter permease subunit | EEJ33_07705 | Not Available | - | 1619694 - 1621394 | 64024.4 |
| abc transporter substrate-binding protein | EEJ33_07710 | Not Available | - | 1621408 - 1622556 | 42415.2 |
| meta domain-containing protein | EEJ33_07715 | Not Available | - | 1622763 - 1623206 | 16375.7 |
| duf1289 domain-containing protein | EEJ33_07720 | Not Available | + | 1623353 - 1623619 | 10363.5 |
| hypothetical protein | EEJ33_07725 | Not Available | - | 1623625 - 1623846 | 8570.2 |
| haaap family serine/threonine permease | EEJ33_07730 | Not Available | - | 1624122 - 1625375 | 45828.0 |
| dmt family transporter | EEJ33_07735 | Not Available | + | 1625712 - 1626575 | 31912.1 |
| magnesium transporter | EEJ33_07740 | Not Available | - | 1626658 - 1628013 | 50064.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


