Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2750 domain-containing protein | EEJ33_07590 | Not Available | + | 1594868 - 1595257 | 15249.8 |
| duf2927 domain-containing protein | EEJ33_07595 | Not Available | - | 1595275 - 1596045 | 28859.5 |
| abc transporter atp-binding protein | EEJ33_07600 | Not Available | - | 1596046 - 1596834 | 29329.0 |
| atp-binding cassette domain-containing protein | EEJ33_07605 | Not Available | - | 1596831 - 1597826 | 37502.8 |
| peptide abc transporter permease sapc | EEJ33_07610 | Not Available | - | 1597826 - 1598713 | 32040.5 |
| antimicrobial peptide abc transporter permease sapb | EEJ33_07615 | Not Available | - | 1598700 - 1599662 | 35724.7 |
| abc transporter substrate-binding protein | EEJ33_07620 | Not Available | - | 1599662 - 1601284 | 60469.8 |
| phage shock protein operon transcriptional activator | EEJ33_07625 | Not Available | - | 1601398 - 1602414 | 38157.6 |
| phage shock protein pspa | EEJ33_07630 | Not Available | + | 1602624 - 1603292 | 25353.2 |
| envelope stress response membrane protein pspb | EEJ33_07635 | Not Available | + | 1603306 - 1603539 | 9154.03 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


