Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septation protein a | EEJ33_07540 | Not Available | - | 1586039 - 1586584 | 20534.9 |
| hypothetical protein | EEJ33_07545 | Not Available | - | 1586817 - 1587086 | 10246.2 |
| ydcf family protein | EEJ33_07550 | Not Available | - | 1587239 - 1587886 | 24375.1 |
| nad-dependent epimerase/dehydratase family protein | EEJ33_07555 | Not Available | - | 1587879 - 1588709 | 30446.7 |
| tigr02647 family protein | EEJ33_07560 | Not Available | - | 1588813 - 1589046 | 8461.03 |
| rna helicase | EEJ33_07565 | Not Available | - | 1589060 - 1589200 | 4906.85 |
| formate transporter foca | EEJ33_07570 | Not Available | + | 1589398 - 1590240 | 30513.1 |
| alpha-galactosidase | EEJ33_07575 | Not Available | + | 1590648 - 1592384 | 66035.4 |
| hypothetical protein | EEJ33_07580 | Not Available | - | 1592434 - 1593642 | 43424.2 |
| manganese-dependent inorganic pyrophosphatase | EEJ33_07585 | Not Available | + | 1593828 - 1594733 | 32994.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


