Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ygiq family radical sam protein | EEJ33_07490 | Not Available | - | 1571870 - 1574239 | 88197.3 |
| eal domain-containing protein | EEJ33_07495 | Not Available | + | 1574519 - 1576975 | 91639.7 |
| insulinase family protein | EEJ33_07500 | Not Available | - | 1577100 - 1579868 | 104275.0 |
| hypothetical protein | EEJ33_07505 | Not Available | + | 1580092 - 1580778 | 24834.7 |
| duf4250 domain-containing protein | EEJ33_07510 | Not Available | + | 1580895 - 1581095 | 7639.14 |
| hth-type transcriptional regulator metr | EEJ33_07515 | Not Available | - | 1581102 - 1582019 | 34298.7 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | EEJ33_07520 | Not Available | + | 1582290 - 1584575 | 85142.4 |
| hypothetical protein | EEJ33_07525 | Not Available | - | 1584689 - 1585180 | 17864.1 |
| ycii family protein | EEJ33_07530 | Not Available | - | 1585089 - 1585385 | 10808.9 |
| acyl-coa thioester hydrolase ycia | EEJ33_07535 | Not Available | - | 1585460 - 1585900 | 15662.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


