Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | EEJ33_07390 | Not Available | - | 1548524 - 1549255 | 27582.7 |
| hypothetical protein | EEJ33_07395 | Not Available | - | 1549315 - 1549518 | 7638.53 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EEJ33_07400 | Not Available | + | 1549522 - 1550802 | 46051.2 |
| duf2498 family protein | EEJ33_07405 | Not Available | - | 1550894 - 1551142 | 9537.58 |
| type i dna topoisomerase | EEJ33_07410 | Not Available | + | 1551479 - 1554109 | 97955.9 |
| glucose-1-phosphate adenylyltransferase | EEJ33_07415 | Not Available | + | 1554904 - 1556121 | 45481.6 |
| glycogen synthase glga | EEJ33_07420 | Not Available | + | 1556123 - 1557577 | 54956.8 |
| alpha/beta hydrolase | EEJ33_07425 | Not Available | + | 1557765 - 1558583 | 31874.3 |
| duf2007 domain-containing protein | EEJ33_07430 | Not Available | - | 1558588 - 1558899 | 11640.0 |
| tvp38/tmem64 family protein | EEJ33_07435 | Not Available | - | 1558933 - 1559622 | 25157.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


