Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EEJ33_07335 | Not Available | + | 1538981 - 1539610 | 23773.1 |
| nad-dependent succinate-semialdehyde dehydrogenase | EEJ33_07340 | Not Available | + | 1539628 - 1541094 | 52372.9 |
| duf1496 domain-containing protein | EEJ33_07345 | Not Available | - | 1541075 - 1541356 | 10097.2 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | EEJ33_07350 | Not Available | - | 1541401 - 1542312 | 34798.8 |
| hypothetical protein | EEJ33_07355 | Not Available | - | 1542306 - 1542521 | 8213.11 |
| tetr/acrr family transcriptional regulator | EEJ33_07360 | Not Available | + | 1542797 - 1543471 | 25383.6 |
| acyl-coa dehydrogenase | EEJ33_07365 | Not Available | + | 1543527 - 1545809 | 83278.4 |
| trans-2-enoyl-coa reductase family protein | EEJ33_07370 | Not Available | + | 1546008 - 1547213 | 44059.4 |
| translation initiation factor if-1 | EEJ33_07380 | Not Available | - | 1547517 - 1547735 | 8223.14 |
| arginyltransferase | EEJ33_07385 | Not Available | - | 1547819 - 1548520 | 27351.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


