Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dash family cryptochrome | EEJ33_07285 | Not Available | - | 1527685 - 1529070 | 52678.5 |
| thiol-disulfide oxidoreductase dcc family protein | EEJ33_07290 | Not Available | + | 1529222 - 1529617 | 15308.9 |
| nyn domain-containing protein | EEJ33_07295 | Not Available | + | 1529740 - 1530213 | 18019.6 |
| duf2986 domain-containing protein | EEJ33_07300 | Not Available | - | 1530205 - 1530408 | 7534.99 |
| Trna-ser | Not Available | Not Available | + | 1530539 - 1530626 | Not Available |
| efflux rnd transporter permease subunit vexd | EEJ33_07310 | Not Available | - | 1530838 - 1533888 | 110819.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit vexc | EEJ33_07315 | Not Available | - | 1533888 - 1534982 | 39861.8 |
| membrane integrity-associated transporter subunit pqic | EEJ33_07320 | Not Available | - | 1535199 - 1535777 | 21809.3 |
| intermembrane transport protein pqib | EEJ33_07325 | Not Available | - | 1535774 - 1537402 | 60358.9 |
| paraquat-inducible protein a | EEJ33_07330 | Not Available | - | 1537417 - 1538715 | 48558.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


