Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | EEJ33_07235 | Not Available | + | 1516472 - 1516990 | 18476.7 |
| tol-pal system protein ybgf | EEJ33_07240 | Not Available | + | 1517006 - 1517776 | 28317.2 |
| quinolinate synthase nada | EEJ33_07245 | Not Available | + | 1517948 - 1519009 | 38565.8 |
| yeca family protein | EEJ33_07250 | Not Available | - | 1519083 - 1519655 | 21684.7 |
| response regulator | EEJ33_07255 | Not Available | + | 1519863 - 1522073 | 82586.6 |
| l-alanine exporter alae | EEJ33_07260 | Not Available | + | 1522417 - 1522869 | 16591.5 |
| aldehyde dehydrogenase | EEJ33_07265 | Not Available | - | 1523094 - 1524614 | 55341.1 |
| sigma-54-dependent fis family transcriptional regulator | EEJ33_07270 | Not Available | + | 1524895 - 1526658 | 65400.6 |
| dna-binding protein vf530 | EEJ33_07275 | Not Available | + | 1526755 - 1526970 | 8243.91 |
| sdr family oxidoreductase | EEJ33_07280 | Not Available | - | 1526981 - 1527688 | 25564.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


