Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | EEJ33_07185 | Not Available | + | 1507660 - 1508664 | 37343.2 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | EEJ33_07190 | Not Available | + | 1509084 - 1510709 | 60557.8 |
| cytochrome d ubiquinol oxidase subunit ii | EEJ33_07195 | Not Available | + | 1510727 - 1511863 | 41648.3 |
| cytochrome bd-i oxidase subunit cydx | EEJ33_07200 | Not Available | + | 1511876 - 1511983 | 4119.06 |
| cyd operon protein ybge | EEJ33_07205 | Not Available | + | 1511976 - 1512293 | 11988.8 |
| tol-pal system-associated acyl-coa thioesterase | EEJ33_07210 | Not Available | + | 1512402 - 1512869 | 17542.2 |
| protein tolq | EEJ33_07215 | Not Available | + | 1512859 - 1513542 | 24927.5 |
| exbd/tolr family protein | EEJ33_07220 | Not Available | + | 1513545 - 1513985 | 15710.2 |
| cell envelope integrity protein tola | EEJ33_07225 | Not Available | + | 1514003 - 1515073 | 40030.4 |
| tol-pal system protein tolb | EEJ33_07230 | Not Available | + | 1515088 - 1516440 | 49752.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


