Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase ding | EEJ33_07135 | Not Available | - | 1497339 - 1499414 | 77153.8 |
| porin | EEJ33_07140 | Not Available | + | 1499924 - 1500892 | 35188.8 |
| duf2057 domain-containing protein | EEJ33_07145 | Not Available | + | 1500982 - 1501629 | 24115.1 |
| hypothetical protein | EEJ33_07150 | Not Available | - | 1501661 - 1502116 | 17351.5 |
| eal domain-containing protein | EEJ33_07155 | Not Available | - | 1502178 - 1503392 | 45636.4 |
| udp-2,3-diacylglucosamine diphosphatase | EEJ33_07160 | Not Available | - | 1503488 - 1504228 | 28347.3 |
| peptidylprolyl isomerase | EEJ33_07165 | Not Available | - | 1504269 - 1504763 | 18258.5 |
| cysteine--trna ligase | EEJ33_07170 | Not Available | + | 1504909 - 1506288 | 52129.5 |
| crossover junction endodeoxyribonuclease ruvc | EEJ33_07175 | Not Available | + | 1506376 - 1506897 | 18390.4 |
| holliday junction branch migration protein ruva | EEJ33_07180 | Not Available | + | 1506990 - 1507604 | 22065.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


