Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3360 domain-containing protein | EEJ33_07085 | Not Available | - | 1487006 - 1488559 | 55919.6 |
| atp-binding cassette domain-containing protein | EEJ33_07090 | Not Available | + | 1489256 - 1490026 | 28615.8 |
| abc transporter substrate-binding protein | EEJ33_07095 | Not Available | + | 1490206 - 1490988 | 28669.4 |
| abc transporter permease | EEJ33_07100 | Not Available | + | 1491135 - 1491875 | 27227.2 |
| abc transporter permease | EEJ33_07105 | Not Available | + | 1491878 - 1492555 | 25508.6 |
| exodeoxyribonuclease iii | EEJ33_07110 | Not Available | - | 1492613 - 1493419 | 31185.0 |
| methyl-accepting chemotaxis protein | EEJ33_07115 | Not Available | + | 1493617 - 1495737 | 76931.3 |
| duf2496 domain-containing protein | EEJ33_07120 | Not Available | - | 1495761 - 1495973 | 7543.96 |
| prepilin peptidase | EEJ33_07125 | Not Available | - | 1495974 - 1496537 | 21751.2 |
| hypothetical protein | EEJ33_07130 | Not Available | - | 1496522 - 1497301 | 27718.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


