Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | EEJ33_07035 | Not Available | + | 1472968 - 1473726 | 27765.4 |
| spovr family protein | EEJ33_07040 | Not Available | - | 1473829 - 1475379 | 60911.4 |
| yeah/yhbh family protein | EEJ33_07045 | Not Available | - | 1475392 - 1476663 | 48970.9 |
| prka family serine protein kinase | EEJ33_07050 | Not Available | - | 1476806 - 1478740 | 74166.8 |
| yfbu family protein | EEJ33_07055 | Not Available | - | 1478980 - 1479480 | 19913.0 |
| hypothetical protein | EEJ33_07060 | Not Available | - | 1479601 - 1480263 | 25305.2 |
| pyruvate formate lyase 1-activating protein | EEJ33_07065 | Not Available | - | 1480329 - 1481069 | 28064.5 |
| methyl-accepting chemotaxis protein | EEJ33_07070 | Not Available | + | 1481402 - 1483282 | 68084.2 |
| lipid a deacylase lpxr family protein | EEJ33_07075 | Not Available | - | 1483300 - 1484328 | 38204.8 |
| formate c-acetyltransferase | EEJ33_07080 | Not Available | - | 1484464 - 1486740 | 84875.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


