Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | EEJ33_06985 | Not Available | - | 1459769 - 1463236 | 130340.0 |
| pilz domain-containing protein | EEJ33_06990 | Not Available | - | 1463239 - 1463814 | 21917.2 |
| lipoprotein-releasing abc transporter permease subunit lolc | EEJ33_06995 | Not Available | + | 1463978 - 1465198 | 43705.8 |
| lipoprotein-releasing abc transporter atp-binding protein lold | EEJ33_07000 | Not Available | + | 1465191 - 1465877 | 24945.2 |
| lipoprotein-releasing abc transporter permease subunit lole | EEJ33_07005 | Not Available | + | 1465878 - 1467122 | 44885.1 |
| duf2062 domain-containing protein | EEJ33_07010 | Not Available | - | 1467237 - 1467767 | 19962.1 |
| dna internalization-related competence protein comec/rec2 | EEJ33_07015 | Not Available | + | 1467761 - 1470019 | 84851.7 |
| lipid a abc transporter atp-binding protein/permease msba | EEJ33_07020 | Not Available | + | 1470050 - 1471798 | 64496.9 |
| tetraacyldisaccharide 4'-kinase | EEJ33_07025 | Not Available | + | 1471798 - 1472808 | 37255.0 |
| trm112 family protein | EEJ33_07030 | Not Available | + | 1472789 - 1472968 | 6788.41 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


