Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| comea family dna-binding protein | EEJ33_06835 | Not Available | + | 1424671 - 1424982 | 10935.4 |
| (d)cmp kinase | EEJ33_06840 | Not Available | + | 1425165 - 1425842 | 24645.7 |
| 30s ribosomal protein s1 | EEJ33_06845 | Not Available | + | 1425951 - 1427621 | 61039.4 |
| integration host factor subunit beta | EEJ33_06850 | Not Available | + | 1427911 - 1428189 | 10546.7 |
| duf1049 domain-containing protein | EEJ33_06855 | Not Available | + | 1428328 - 1428609 | 10129.8 |
| lipopolysaccharide assembly protein lapb | EEJ33_06860 | Not Available | + | 1428621 - 1429790 | 44518.8 |
| orotidine-5'-phosphate decarboxylase | EEJ33_06865 | Not Available | + | 1429864 - 1430559 | 25013.4 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | EEJ33_06870 | Not Available | - | 1430615 - 1431391 | 29859.0 |
| dna repair protein | EEJ33_06875 | Not Available | - | 1431453 - 1432217 | 28946.0 |
| hth-type transcriptional regulator cysb | EEJ33_06880 | Not Available | + | 1432506 - 1433480 | 36144.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


