Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | EEJ33_06785 | Not Available | + | 1411080 - 1412441 | 48128.6 |
| sigma-54-dependent fis family transcriptional regulator | EEJ33_06790 | Not Available | - | 1412557 - 1413897 | 49825.1 |
| sensor histidine kinase | EEJ33_06795 | Not Available | - | 1413900 - 1415693 | 68067.9 |
| hypothetical protein | EEJ33_06800 | Not Available | - | 1415666 - 1416085 | 15780.1 |
| trigger factor | EEJ33_06805 | Not Available | + | 1416192 - 1417493 | 47969.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EEJ33_06810 | Not Available | + | 1417599 - 1418225 | 23083.8 |
| atp-dependent clp protease atp-binding subunit clpx | EEJ33_06815 | Not Available | + | 1418305 - 1419585 | 46492.9 |
| endopeptidase la | EEJ33_06820 | Not Available | + | 1419708 - 1422068 | 88019.0 |
| dna-binding protein hu-beta | EEJ33_06825 | Not Available | + | 1422252 - 1422524 | 9366.16 |
| peptidylprolyl isomerase | EEJ33_06830 | Not Available | + | 1422677 - 1424536 | 68377.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


