Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integrase | EEJ33_06735 | Not Available | + | 1401237 - 1401542 | 11297.2 |
| hypothetical protein | EEJ33_06740 | Not Available | + | 1401561 - 1402856 | 48897.7 |
| lyse family translocator | EEJ33_06745 | Not Available | - | 1403133 - 1403753 | 22511.4 |
| acyl-coa thioesterase | EEJ33_06750 | Not Available | - | 1404047 - 1404496 | 16756.3 |
| bifunctional diguanylate cyclase/phosphodiesterase | EEJ33_06755 | Not Available | - | 1404661 - 1406628 | 75997.3 |
| oxidoreductase | EEJ33_06760 | Not Available | - | 1406592 - 1407062 | 17637.5 |
| hypothetical protein | EEJ33_06765 | Not Available | + | 1407248 - 1407418 | 6276.95 |
| ydiu family protein | EEJ33_06770 | Not Available | + | 1407590 - 1409116 | 57528.4 |
| dctp family trap transporter solute-binding subunit | EEJ33_06775 | Not Available | + | 1409348 - 1410346 | 37104.1 |
| trap transporter small permease | EEJ33_06780 | Not Available | + | 1410378 - 1411076 | 26775.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


