Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1244 domain-containing protein | EEJ33_06635 | Not Available | + | 1382958 - 1383281 | 12422.7 |
| lipoporotein nlpe | EEJ33_06640 | Not Available | - | 1383364 - 1383855 | 17408.4 |
| hypothetical protein | EEJ33_06645 | Not Available | - | 1383925 - 1384104 | 6981.53 |
| cell division topological specificity factor mine | EEJ33_06650 | Not Available | - | 1384125 - 1384388 | 9911.98 |
| septum site-determining protein mind | EEJ33_06655 | Not Available | - | 1384393 - 1385205 | 29457.5 |
| septum site-determining protein minc | EEJ33_06660 | Not Available | - | 1385226 - 1385888 | 23647.4 |
| hypothetical protein | EEJ33_06665 | Not Available | + | 1386088 - 1386366 | 10821.3 |
| lytic murein transglycosylase | EEJ33_06670 | Not Available | + | 1386391 - 1387362 | 36875.9 |
| lysr family transcriptional regulator | EEJ33_06675 | Not Available | + | 1387526 - 1388473 | 35788.8 |
| nupc/nupg family nucleoside cnt transporter | EEJ33_06680 | Not Available | + | 1388803 - 1390020 | 42177.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


