Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | EEJ33_06585 | Not Available | + | 1370860 - 1372167 | 48648.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EEJ33_06590 | Not Available | + | 1372164 - 1373876 | 62217.7 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | EEJ33_06595 | Not Available | + | 1373866 - 1374657 | 28997.7 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EEJ33_06600 | Not Available | + | 1374682 - 1375548 | 32003.1 |
| o-succinylbenzoate synthase | EEJ33_06605 | Not Available | + | 1375637 - 1376635 | 36632.1 |
| o-succinylbenzoate--coa ligase | EEJ33_06610 | Not Available | + | 1376611 - 1378041 | 52014.3 |
| benzoate transporter bene | EEJ33_06615 | Not Available | - | 1378070 - 1379230 | 41110.7 |
| mfs transporter | EEJ33_06620 | Not Available | - | 1379266 - 1381146 | 69088.8 |
| tetr/acrr family transcriptional regulator | EEJ33_06625 | Not Available | - | 1381150 - 1381740 | 22674.2 |
| duf1517 domain-containing protein | EEJ33_06630 | Not Available | + | 1381934 - 1382809 | 31906.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


