Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein para | EEJ33_06530 | Not Available | + | 1361134 - 1361439 | 11032.1 |
| slp family lipoprotein | EEJ33_06535 | Not Available | + | 1361456 - 1362013 | 20901.1 |
| alpha/beta hydrolase | EEJ33_06540 | Not Available | + | 1362010 - 1362864 | 31298.6 |
| long-chain-fatty-acid--coa ligase fadd | EEJ33_06545 | Not Available | + | 1362989 - 1364689 | 62863.6 |
| ribonuclease d | EEJ33_06550 | Not Available | + | 1364775 - 1365920 | 43305.5 |
| rhombosortase | EEJ33_06555 | Not Available | - | 1366029 - 1366586 | 20640.7 |
| dtw domain-containing protein | EEJ33_06560 | Not Available | + | 1366590 - 1367192 | 23164.9 |
| deoxyguanosinetriphosphate triphosphohydrolase family protein | EEJ33_06565 | Not Available | - | 1367186 - 1368511 | 49940.6 |
| 5'-deoxynucleotidase | EEJ33_06575 | Not Available | - | 1368694 - 1369278 | 22242.7 |
| pyridoxal phosphate-dependent aminotransferase | EEJ33_06580 | Not Available | - | 1369431 - 1370645 | 45222.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


