Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2989 domain-containing protein | EEJ33_06480 | Not Available | - | 1350432 - 1351253 | 31142.3 |
| duf1315 family protein | EEJ33_06485 | Not Available | + | 1351357 - 1351644 | 10712.6 |
| l-asparaginase 1 | EEJ33_06490 | Not Available | - | 1351742 - 1352755 | 36739.4 |
| signal peptide peptidase sppa | EEJ33_06495 | Not Available | - | 1352872 - 1354722 | 67264.6 |
| nadph-dependent 2,4-dienoyl-coa reductase | EEJ33_06500 | Not Available | + | 1354952 - 1356952 | 73317.3 |
| formyltetrahydrofolate deformylase | EEJ33_06505 | Not Available | - | 1357026 - 1357859 | 31350.7 |
| hypothetical protein | EEJ33_06510 | Not Available | + | 1357804 - 1357995 | 7055.59 |
| hypothetical protein | EEJ33_06515 | Not Available | - | 1358033 - 1358470 | 16889.9 |
| atp-dependent dna helicase | EEJ33_06520 | Not Available | + | 1358424 - 1360364 | 71699.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EEJ33_06525 | Not Available | + | 1360361 - 1361074 | 25590.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


