Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | EEJ33_06425 | Not Available | - | 1339607 - 1341052 | 52338.4 |
| rok family protein | EEJ33_06430 | Not Available | + | 1341496 - 1342713 | 44308.7 |
| chemotaxis protein chev | EEJ33_06435 | Not Available | + | 1342818 - 1343762 | 35472.9 |
| hypothetical protein | EEJ33_06440 | Not Available | - | 1343837 - 1344193 | 12327.6 |
| hypothetical protein | EEJ33_06445 | Not Available | - | 1344333 - 1345310 | 36450.5 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | EEJ33_06450 | Not Available | - | 1345331 - 1346149 | 31308.4 |
| duf2860 domain-containing protein | EEJ33_06455 | Not Available | - | 1346303 - 1347307 | 36981.9 |
| d-hexose-6-phosphate mutarotase | EEJ33_06465 | Not Available | - | 1347613 - 1348503 | 32805.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EEJ33_06470 | Not Available | - | 1348651 - 1349646 | 35271.0 |
| peptide-methionine (r)-s-oxide reductase | EEJ33_06475 | Not Available | + | 1349946 - 1350389 | 16779.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


