Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf454 domain-containing protein | EEJ33_06375 | Not Available | + | 1331062 - 1331460 | 15303.2 |
| adenine phosphoribosyltransferase | EEJ33_06380 | Not Available | + | 1331596 - 1332141 | 19693.9 |
| dna polymerase iii subunit gamma/tau | EEJ33_06385 | Not Available | + | 1332160 - 1334244 | 76499.6 |
| ybab/ebfc family nucleoid-associated protein | EEJ33_06390 | Not Available | + | 1334315 - 1334644 | 12036.7 |
| recombination protein recr | EEJ33_06395 | Not Available | + | 1334659 - 1335261 | 21784.3 |
| mets family nss transporter small subunit | EEJ33_06400 | Not Available | - | 1335507 - 1335608 | 3411.47 |
| sodium-dependent transporter | EEJ33_06405 | Not Available | - | 1335611 - 1337068 | 53097.1 |
| porin family protein | EEJ33_06410 | Not Available | - | 1337574 - 1338164 | 21478.4 |
| ynhf family membrane protein | EEJ33_06415 | Not Available | + | 1338300 - 1338389 | 3102.96 |
| patatin family protein | EEJ33_06420 | Not Available | + | 1338396 - 1339565 | 44511.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


