Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic hydrocarbon degradation protein | EEJ33_06320 | Not Available | - | 1319409 - 1320680 | 45654.0 |
| transporter | EEJ33_06325 | Not Available | - | 1320983 - 1322260 | 46208.0 |
| duf3379 domain-containing protein | EEJ33_06330 | Not Available | - | 1322520 - 1323281 | 28333.1 |
| sigma-70 family rna polymerase sigma factor | EEJ33_06335 | Not Available | - | 1323244 - 1323810 | 22560.8 |
| acetyl-coa c-acyltransferase fadi | EEJ33_06345 | Not Available | + | 1324355 - 1325662 | 46356.3 |
| fatty acid oxidation complex subunit alpha fadj | EEJ33_06350 | Not Available | + | 1325662 - 1327788 | 77294.7 |
| nad(p)h nitroreductase | EEJ33_06355 | Not Available | + | 1327914 - 1328462 | 19738.9 |
| lysr family transcriptional regulator | EEJ33_06360 | Not Available | - | 1328544 - 1329443 | 34296.4 |
| response regulator | EEJ33_06365 | Not Available | + | 1329652 - 1330761 | 41331.4 |
| hypothetical protein | EEJ33_06370 | Not Available | + | 1330931 - 1331062 | 4958.14 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


