Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc/cadmium/mercury/lead-transporting atpase | EEJ33_06270 | Not Available | + | 1307122 - 1309428 | 81369.8 |
| uridine phosphorylase | EEJ33_06275 | Not Available | + | 1309888 - 1310649 | 27107.7 |
| hypothetical protein | EEJ33_06280 | Not Available | - | 1310729 - 1311622 | 34433.6 |
| methionine--trna ligase | EEJ33_06285 | Not Available | - | 1311848 - 1313899 | 76906.3 |
| iron-sulfur cluster carrier protein apbc | EEJ33_06290 | Not Available | + | 1313985 - 1315133 | 40775.3 |
| hypothetical protein | EEJ33_06295 | Not Available | - | 1315126 - 1315311 | 7186.93 |
| uridine kinase | EEJ33_06300 | Not Available | + | 1315310 - 1315951 | 24215.4 |
| asma family protein | EEJ33_06305 | Not Available | + | 1316049 - 1318154 | 75126.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EEJ33_06310 | Not Available | - | 1318227 - 1318832 | 22411.8 |
| low molecular weight phosphotyrosine protein phosphatase | EEJ33_06315 | Not Available | + | 1318918 - 1319382 | 17245.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


