Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | EEJ33_06120 | Not Available | + | 1281394 - 1282671 | 45933.0 |
| spor domain-containing protein | EEJ33_06125 | Not Available | + | 1282661 - 1283266 | 21870.4 |
| bacteriocin production protein | EEJ33_06130 | Not Available | + | 1283329 - 1283820 | 17770.9 |
| amidophosphoribosyltransferase | EEJ33_06135 | Not Available | + | 1283853 - 1285367 | 55990.7 |
| trap transporter large permease subunit | EEJ33_06140 | Not Available | - | 1285473 - 1286798 | 46061.9 |
| ribonuclease t | EEJ33_06145 | Not Available | - | 1286899 - 1287630 | 27126.1 |
| ompa family protein | EEJ33_06150 | Not Available | + | 1287847 - 1288731 | 33562.6 |
| duf2753 family protein | EEJ33_06155 | Not Available | - | 1288780 - 1289220 | 17097.8 |
| lactoylglutathione lyase | EEJ33_06160 | Not Available | - | 1289380 - 1289796 | 15175.1 |
| endonuclease iii | EEJ33_06165 | Not Available | - | 1289837 - 1290478 | 23990.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


