Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription/translation regulatory transformer protein rfah | EEJ33_06070 | Not Available | + | 1263928 - 1264425 | 19306.4 |
| asparagine synthase b | EEJ33_06075 | Not Available | - | 1264589 - 1266253 | 62323.3 |
| potassium transporter kef | EEJ33_06080 | Not Available | - | 1266449 - 1268035 | 58047.8 |
| rok family protein | EEJ33_06085 | Not Available | - | 1268130 - 1269344 | 43859.0 |
| n-acetylglucosamine-6-phosphate deacetylase | EEJ33_06090 | Not Available | - | 1269347 - 1270483 | 40958.2 |
| pts n-acetylmuramic acid transporter subunit iibc | EEJ33_06095 | Not Available | + | 1270952 - 1272523 | 55168.9 |
| glutamine--trna ligase | EEJ33_06100 | Not Available | + | 1272771 - 1274441 | 64133.9 |
| aspartate-semialdehyde dehydrogenase | EEJ33_06105 | Not Available | + | 1274606 - 1279333 | 173454.0 |
| trna pseudouridine(38-40) synthase trua | EEJ33_06110 | Not Available | + | 1279455 - 1280249 | 29892.7 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | EEJ33_06115 | Not Available | + | 1280423 - 1281349 | 33797.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


