Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EEJ33_06020 | Not Available | - | 1253180 - 1254007 | 31181.8 |
| tigr01777 family protein | EEJ33_06025 | Not Available | - | 1254050 - 1254964 | 34150.4 |
| phosphodiesterase | EEJ33_06030 | Not Available | + | 1255248 - 1255796 | 19803.9 |
| selt/selw/selh family protein | EEJ33_06035 | Not Available | - | 1255898 - 1256191 | 11413.5 |
| hypothetical protein | EEJ33_06040 | Not Available | - | 1256233 - 1256754 | 19676.4 |
| transcriptional regulator | EEJ33_06045 | Not Available | - | 1256764 - 1257645 | 32663.0 |
| molecular chaperone htpg | EEJ33_06050 | Not Available | + | 1257873 - 1259780 | 72173.3 |
| adenylate kinase | EEJ33_06055 | Not Available | + | 1260111 - 1260755 | 23251.9 |
| ferrochelatase | EEJ33_06060 | Not Available | + | 1260870 - 1261844 | 36700.5 |
| dipeptide/tripeptide permease dtpa | EEJ33_06065 | Not Available | - | 1261938 - 1263482 | 55602.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


