Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter corc | EEJ33_05915 | Not Available | - | 1233579 - 1234454 | 32916.9 |
| rrna maturation rnase ybey | EEJ33_05920 | Not Available | - | 1234524 - 1234988 | 17517.6 |
| phoh family protein | EEJ33_05925 | Not Available | - | 1234985 - 1236088 | 41558.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EEJ33_05930 | Not Available | - | 1236156 - 1237580 | 53597.2 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | EEJ33_05935 | Not Available | + | 1237834 - 1238997 | 43118.7 |
| pts glucose transporter subunit iia | EEJ33_05940 | Not Available | - | 1239110 - 1239619 | 18023.7 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | EEJ33_05945 | Not Available | - | 1239728 - 1241449 | 63147.0 |
| phosphocarrier protein hpr | EEJ33_05950 | Not Available | - | 1241583 - 1241840 | 9109.93 |
| hypothetical protein | EEJ33_05955 | Not Available | - | 1241925 - 1242134 | 7656.75 |
| cysteine synthase a | EEJ33_05960 | Not Available | - | 1242138 - 1243106 | 34240.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


