Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | EEJ33_05865 | Not Available | - | 1222242 - 1223033 | 29332.7 |
| rod shape-determining protein roda | EEJ33_05870 | Not Available | - | 1223033 - 1224154 | 40663.5 |
| penicillin-binding protein 2 | EEJ33_05875 | Not Available | - | 1224151 - 1226055 | 71648.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EEJ33_05880 | Not Available | - | 1226062 - 1226532 | 17521.3 |
| ribosome silencing factor | EEJ33_05885 | Not Available | - | 1226535 - 1226852 | 11606.0 |
| dna polymerase iii subunit delta | EEJ33_05890 | Not Available | - | 1226921 - 1227949 | 39120.5 |
| luciferase | EEJ33_05895 | Not Available | - | 1227955 - 1228569 | 23289.7 |
| leucine--trna ligase | EEJ33_05900 | Not Available | - | 1228745 - 1231321 | 96647.1 |
| zinc ribbon-containing protein | EEJ33_05905 | Not Available | + | 1231495 - 1231965 | 17466.7 |
| apolipoprotein n-acyltransferase | EEJ33_05910 | Not Available | - | 1232021 - 1233538 | 57022.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


