Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis tyrosine autokinase | EEJ33_05815 | Not Available | + | 1212399 - 1214612 | 83023.5 |
| hypothetical protein | EEJ33_05820 | Not Available | + | 1214609 - 1215316 | 26809.8 |
| vanz family protein | EEJ33_05825 | Not Available | + | 1215295 - 1215729 | 15986.8 |
| yitt family protein | EEJ33_05830 | Not Available | - | 1215880 - 1216476 | 21740.3 |
| serine hydroxymethyltransferase | EEJ33_05835 | Not Available | + | 1216817 - 1218067 | 45397.2 |
| hypothetical protein | EEJ33_05840 | Not Available | - | 1218231 - 1218584 | 12965.4 |
| lipoyl synthase | EEJ33_05845 | Not Available | - | 1218753 - 1219718 | 36495.4 |
| lipoyl(octanoyl) transferase lipb | EEJ33_05850 | Not Available | - | 1219711 - 1220370 | 25080.3 |
| duf493 family protein | EEJ33_05855 | Not Available | - | 1220549 - 1220827 | 10406.7 |
| d-alanyl-d-alanine carboxypeptidase | EEJ33_05860 | Not Available | - | 1220975 - 1222150 | 42780.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


