Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flap endonuclease xni | EEJ33_05615 | Not Available | - | 1166241 - 1167092 | 31698.7 |
| log family protein | EEJ33_05620 | Not Available | - | 1167131 - 1168504 | 51037.7 |
| ggdef domain-containing protein | EEJ33_05625 | Not Available | - | 1168709 - 1170283 | 60297.7 |
| tetratricopeptide repeat protein | EEJ33_05630 | Not Available | - | 1170385 - 1172646 | 86202.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EEJ33_05635 | Not Available | - | 1172661 - 1173506 | 31936.5 |
| secy-interacting protein | EEJ33_05640 | Not Available | + | 1173555 - 1174151 | 22617.2 |
| hypothetical protein | EEJ33_05645 | Not Available | + | 1174153 - 1174929 | 29458.1 |
| metq/nlpa family lipoprotein | EEJ33_05650 | Not Available | - | 1175062 - 1175871 | 29193.0 |
| abc transporter permease | EEJ33_05655 | Not Available | - | 1175908 - 1176585 | 23818.2 |
| d-methionine abc transporter, atp-binding protein | EEJ33_05660 | Not Available | - | 1176575 - 1177609 | 37577.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


