Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | EEJ33_05565 | Not Available | + | 1156562 - 1157299 | 28198.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EEJ33_05570 | Not Available | - | 1157393 - 1159273 | 68313.5 |
| (2e,6e)-farnesyl diphosphate synthase | EEJ33_05575 | Not Available | - | 1159293 - 1160177 | 32261.7 |
| exodeoxyribonuclease vii small subunit | EEJ33_05580 | Not Available | - | 1160219 - 1160461 | 8980.49 |
| flagellar motor protein poma | EEJ33_05585 | Not Available | + | 1160776 - 1161540 | 27414.2 |
| flagellar motor protein motb | EEJ33_05590 | Not Available | + | 1161552 - 1162508 | 35441.0 |
| trna 4-thiouridine(8) synthase thii | EEJ33_05595 | Not Available | + | 1162812 - 1164263 | 54331.4 |
| hypothetical protein | EEJ33_05600 | Not Available | - | 1164519 - 1164728 | 7846.62 |
| transcriptional regulator gcva | EEJ33_05605 | Not Available | + | 1164882 - 1165802 | 34502.4 |
| duf423 domain-containing protein | EEJ33_05610 | Not Available | + | 1165824 - 1166210 | 13780.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


