Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EEJ33_05515 | Not Available | - | 1149669 - 1150364 | 25834.0 |
| 50s ribosomal protein l31 type b | EEJ33_05520 | Not Available | + | 1150498 - 1150755 | 9929.68 |
| 50s ribosomal protein l36 | EEJ33_05525 | Not Available | + | 1150752 - 1150877 | 4813.07 |
| abgt family transporter | EEJ33_05530 | Not Available | + | 1151078 - 1152664 | 56033.8 |
| yaii/yqxd family protein | EEJ33_05535 | Not Available | - | 1152729 - 1153178 | 16482.9 |
| hypothetical protein | EEJ33_05540 | Not Available | - | 1153175 - 1153474 | 10964.3 |
| n-acetyltransferase | EEJ33_05545 | Not Available | + | 1154328 - 1154861 | 20007.9 |
| duf3301 domain-containing protein | EEJ33_05550 | Not Available | - | 1154818 - 1155120 | 11636.2 |
| duf3549 family protein | EEJ33_05555 | Not Available | - | 1155124 - 1156161 | 38719.8 |
| pseudouridine synthase | EEJ33_05560 | Not Available | + | 1156250 - 1156561 | 11845.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


