Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_05460 | Not Available | + | 1136509 - 1137816 | 47864.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EEJ33_05465 | Not Available | + | 1137806 - 1138222 | 15111.0 |
| abgt family transporter | EEJ33_05475 | Not Available | + | 1138619 - 1140178 | 54928.1 |
| trna adenosine(34) deaminase tada | EEJ33_05480 | Not Available | + | 1140247 - 1140828 | 21222.3 |
| membrane-bound lytic murein transglycosylase mltf | EEJ33_05485 | Not Available | - | 1141184 - 1142782 | 61000.8 |
| hypothetical protein | EEJ33_05490 | Not Available | + | 1142920 - 1143096 | 6611.87 |
| phosphoribosylformylglycinamidine synthase | EEJ33_05495 | Not Available | + | 1143093 - 1146986 | 141385.0 |
| duf4250 domain-containing protein | EEJ33_05500 | Not Available | - | 1147087 - 1147278 | 7117.68 |
| yaep family protein | EEJ33_05505 | Not Available | - | 1147284 - 1147487 | 7179.54 |
| proline--trna ligase | EEJ33_05510 | Not Available | - | 1147728 - 1149443 | 63155.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


