Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnfh family protein | EEJ33_05410 | Not Available | + | 1126991 - 1127302 | 11823.5 |
| outer membrane protein assembly factor bame | EEJ33_05415 | Not Available | - | 1127379 - 1127789 | 15472.5 |
| dna repair protein recn | EEJ33_05420 | Not Available | - | 1127897 - 1129561 | 61265.6 |
| nad(+) kinase | EEJ33_05425 | Not Available | - | 1129691 - 1130575 | 32686.3 |
| nucleotide exchange factor grpe | EEJ33_05430 | Not Available | + | 1130721 - 1131323 | 22632.7 |
| molecular chaperone dnak | EEJ33_05435 | Not Available | + | 1131587 - 1133494 | 68727.7 |
| molecular chaperone dnaj | EEJ33_05440 | Not Available | + | 1133694 - 1134839 | 40824.4 |
| type iv pilin protein | EEJ33_05445 | Not Available | - | 1134889 - 1135332 | 16298.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EEJ33_05450 | Not Available | + | 1135387 - 1135941 | 20417.8 |
| pilus assembly protein pilw | EEJ33_05455 | Not Available | + | 1135922 - 1136512 | 21518.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


