Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | EEJ33_05360 | Not Available | + | 1112095 - 1112889 | 30799.6 |
| type i-f crispr-associated endonuclease cas1 | EEJ33_05365 | Not Available | + | 1113004 - 1113993 | 37612.9 |
| crispr-associated endonuclease cas3'' | EEJ33_05370 | Not Available | + | 1113990 - 1116926 | 110577.0 |
| hypothetical protein | EEJ33_05375 | Not Available | + | 1116930 - 1117877 | 35620.2 |
| hypothetical protein | EEJ33_05380 | Not Available | + | 1117886 - 1118896 | 38083.0 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | EEJ33_05385 | Not Available | + | 1118905 - 1119456 | 20778.1 |
| duf4102 domain-containing protein | EEJ33_05390 | Not Available | - | 1124052 - 1125290 | 47162.1 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | + | 1125456 - 1125822 | Not Available |
| ssra-binding protein smpb | EEJ33_05400 | Not Available | - | 1125891 - 1126376 | 18637.7 |
| type ii toxin-antitoxin system rata family toxin | EEJ33_05405 | Not Available | + | 1126560 - 1126994 | 15929.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


