Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system paar protein | EEJ33_05310 | Not Available | - | 1102750 - 1103049 | 9754.51 |
| glycosyl hydrolase family 26 | EEJ33_05315 | Not Available | - | 1103060 - 1103848 | 30059.2 |
| type vi secretion system paar protein | EEJ33_05320 | Not Available | - | 1104056 - 1104355 | 9754.51 |
| glycosyl hydrolase family 26 | EEJ33_05325 | Not Available | - | 1104366 - 1105154 | 30055.3 |
| type vi secretion system paar protein | EEJ33_05330 | Not Available | - | 1105363 - 1105662 | 9754.51 |
| glycosyl hydrolase family 26 | EEJ33_05335 | Not Available | - | 1105673 - 1106461 | 30107.5 |
| hypothetical protein | EEJ33_05340 | Not Available | - | 1106667 - 1108280 | 59839.4 |
| duf4123 domain-containing protein | EEJ33_05345 | Not Available | - | 1108270 - 1109058 | 30800.1 |
| type vi secretion system tip protein vgrg | EEJ33_05350 | Not Available | - | 1109058 - 1111034 | 72497.0 |
| hcp family type vi secretion system effector | EEJ33_05355 | Not Available | - | 1111161 - 1111679 | 19087.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


