Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase family protein | EEJ33_05255 | Not Available | - | 1095909 - 1096895 | 36019.0 |
| duf2787 domain-containing protein | EEJ33_05260 | Not Available | - | 1096998 - 1097444 | 16829.4 |
| duf2787 domain-containing protein | EEJ33_05265 | Not Available | - | 1097495 - 1097923 | 16792.8 |
| dna repair protein radc | EEJ33_05270 | Not Available | - | 1097920 - 1098396 | 18293.8 |
| alpa family transcriptional regulator | EEJ33_05275 | Not Available | + | 1098510 - 1098716 | 8080.79 |
| duf2628 domain-containing protein | EEJ33_05285 | Not Available | - | 1099488 - 1100117 | 24181.0 |
| hypothetical protein | EEJ33_05290 | Not Available | - | 1100246 - 1100437 | 6634.85 |
| glycosyl hydrolase family 26 | EEJ33_05295 | Not Available | - | 1100448 - 1101236 | 30226.6 |
| type vi secretion system paar protein | EEJ33_05300 | Not Available | - | 1101444 - 1101743 | 9740.48 |
| glycosyl hydrolase family 26 | EEJ33_05305 | Not Available | - | 1101754 - 1102542 | 30296.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


