Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | EEJ33_05150 | Not Available | + | 1073552 - 1074325 | 27686.4 |
| ferredoxin family protein | EEJ33_05155 | Not Available | - | 1074520 - 1074843 | 11935.3 |
| nad(p)/fad-dependent oxidoreductase | EEJ33_05160 | Not Available | + | 1075090 - 1076706 | 58870.8 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | EEJ33_05165 | Not Available | - | 1076855 - 1078570 | 62939.2 |
| putative 2-aminoethylphosphonate abc transporter atp-binding protein | EEJ33_05170 | Not Available | - | 1078590 - 1079651 | 38852.1 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | EEJ33_05175 | Not Available | - | 1079786 - 1080805 | 37731.8 |
| lysr family transcriptional regulator | EEJ33_05180 | Not Available | - | 1081064 - 1081963 | 33950.6 |
| had family hydrolase | EEJ33_05185 | Not Available | + | 1082121 - 1082783 | 25218.9 |
| mfs transporter | EEJ33_05190 | Not Available | - | 1082872 - 1083555 | 24872.0 |
| hypothetical protein | EEJ33_05195 | Not Available | - | 1083527 - 1083679 | 5566.92 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


