Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EEJ33_05095 | Not Available | - | 1061303 - 1063000 | 62084.1 |
| sodium ion-translocating decarboxylase subunit beta | EEJ33_05100 | Not Available | - | 1063071 - 1064372 | 45643.6 |
| oxaloacetate decarboxylase subunit alpha | EEJ33_05105 | Not Available | - | 1064388 - 1066187 | 65055.2 |
| citrate:sodium symporter | EEJ33_05115 | Not Available | - | 1066574 - 1067920 | 47276.1 |
| [citrate (pro-3s)-lyase] ligase | EEJ33_05120 | Not Available | + | 1068182 - 1069252 | 40137.7 |
| citrate lyase acyl carrier protein | EEJ33_05125 | Not Available | + | 1069304 - 1069600 | 10768.9 |
| citrate (pro-3s)-lyase subunit beta | EEJ33_05130 | Not Available | + | 1069582 - 1070472 | 32752.5 |
| citrate lyase subunit alpha | EEJ33_05135 | Not Available | + | 1070483 - 1072012 | 54514.5 |
| citrate lyase holo-[acyl-carrier protein] synthase | EEJ33_05140 | Not Available | + | 1072009 - 1072545 | 20022.6 |
| triphosphoribosyl-dephospho-coa synthase citg | EEJ33_05145 | Not Available | + | 1072523 - 1073464 | 33682.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


