Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | EEJ33_05045 | Not Available | + | 1051676 - 1052728 | 36845.1 |
| fe(3+)-siderophore abc transporter permease | EEJ33_05050 | Not Available | + | 1052707 - 1053783 | 37448.4 |
| abc transporter atp-binding protein | EEJ33_05055 | Not Available | + | 1053900 - 1054739 | 30859.6 |
| 4'-phosphopantetheinyl transferase superfamily protein | EEJ33_05060 | Not Available | + | 1054742 - 1055434 | 25471.8 |
| alanine:cation symporter family protein | EEJ33_05065 | Not Available | - | 1055472 - 1057022 | 55406.9 |
| d-amino acid dehydrogenase | EEJ33_05070 | Not Available | - | 1057393 - 1058658 | 46326.9 |
| lysr family transcriptional regulator | EEJ33_05075 | Not Available | + | 1058759 - 1059691 | 35601.5 |
| 4,5-dioxygenase | EEJ33_05080 | Not Available | + | 1059816 - 1060145 | 12933.4 |
| hypothetical protein | EEJ33_05085 | Not Available | + | 1060311 - 1060583 | 10295.3 |
| response regulator | EEJ33_05090 | Not Available | - | 1060606 - 1061289 | 26048.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


