Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | EEJ33_04995 | Not Available | + | 1038250 - 1039713 | 51691.4 |
| glutamine-hydrolyzing gmp synthase | EEJ33_05000 | Not Available | + | 1039820 - 1041373 | 57767.2 |
| carbohydrate-binding protein | EEJ33_05005 | Not Available | + | 1041609 - 1043333 | 63163.8 |
| hypothetical protein | EEJ33_05010 | Not Available | + | 1043524 - 1044117 | 21121.4 |
| vibriobactin biosynthesis bifunctional isochorismatase/aryl carrier protein vibb | EEJ33_05015 | Not Available | + | 1044429 - 1045310 | 32527.0 |
| (2,3-dihydroxybenzoyl)adenylate synthase | EEJ33_05020 | Not Available | - | 1045411 - 1047042 | 60029.6 |
| isochorismate synthase | EEJ33_05025 | Not Available | - | 1047053 - 1048240 | 43579.4 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | EEJ33_05030 | Not Available | + | 1048408 - 1049196 | 28106.3 |
| vibriobactin biosynthesis amide synthase vibh | EEJ33_05035 | Not Available | - | 1049208 - 1050524 | 49954.4 |
| fe2+-enterobactin abc transporter substrate-binding protein | EEJ33_05040 | Not Available | + | 1050702 - 1051679 | 36042.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


