Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | EEJ33_04945 | Not Available | + | 1026810 - 1027931 | 42107.9 |
| cytoskeleton protein rodz | EEJ33_04950 | Not Available | + | 1028245 - 1029315 | 38628.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EEJ33_04955 | Not Available | + | 1029320 - 1030450 | 40914.3 |
| histidine--trna ligase | EEJ33_04960 | Not Available | + | 1030476 - 1031744 | 46918.5 |
| hypothetical protein | EEJ33_04965 | Not Available | + | 1031781 - 1032395 | 22382.4 |
| outer membrane protein assembly factor bamb | EEJ33_04970 | Not Available | + | 1032408 - 1033568 | 41090.9 |
| ribosome biogenesis gtpase der | EEJ33_04975 | Not Available | + | 1033761 - 1035245 | 55613.8 |
| alanyl-trna editing protein | EEJ33_04980 | Not Available | + | 1035266 - 1036183 | 34110.1 |
| dna ligase | EEJ33_04985 | Not Available | + | 1036488 - 1036721 | 8611.09 |
| exodeoxyribonuclease vii large subunit | EEJ33_04990 | Not Available | - | 1036702 - 1038042 | 50448.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


