Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator iscr | EEJ33_04895 | Not Available | + | 1018852 - 1019418 | 20391.4 |
| iscs subfamily cysteine desulfurase | EEJ33_04900 | Not Available | + | 1019445 - 1020659 | 44825.6 |
| fe-s cluster assembly scaffold iscu | EEJ33_04905 | Not Available | + | 1020696 - 1021079 | 13662.2 |
| iron-sulfur cluster assembly protein isca | EEJ33_04910 | Not Available | + | 1021140 - 1021463 | 11717.8 |
| co-chaperone hscb | EEJ33_04915 | Not Available | + | 1021512 - 1022027 | 19672.5 |
| fe-s protein assembly chaperone hsca | EEJ33_04920 | Not Available | + | 1022051 - 1023901 | 65738.4 |
| isc system 2fe-2s type ferredoxin | EEJ33_04925 | Not Available | + | 1023915 - 1024253 | 12335.5 |
| fe-s assembly protein iscx | EEJ33_04930 | Not Available | + | 1024302 - 1024496 | 7773.1 |
| aminopeptidase pepb | EEJ33_04935 | Not Available | + | 1024716 - 1026005 | 46749.7 |
| nucleoside-diphosphate kinase | EEJ33_04940 | Not Available | + | 1026208 - 1026636 | 15945.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


