Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | EEJ33_04840 | Not Available | + | 1007186 - 1008856 | 62860.4 |
| isocitrate lyase | EEJ33_04845 | Not Available | + | 1008986 - 1010299 | 47996.3 |
| cbs domain-containing protein | EEJ33_04850 | Not Available | - | 1010458 - 1010967 | 18720.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EEJ33_04855 | Not Available | + | 1011197 - 1012255 | 39414.0 |
| trna guanosine(34) transglycosylase tgt | EEJ33_04865 | Not Available | + | 1012484 - 1013623 | 43255.9 |
| preprotein translocase subunit yajc | EEJ33_04870 | Not Available | + | 1013728 - 1014060 | 11917.8 |
| protein translocase subunit secd | EEJ33_04875 | Not Available | + | 1014082 - 1015935 | 66823.6 |
| protein translocase subunit secf | EEJ33_04880 | Not Available | + | 1015950 - 1016897 | 34344.3 |
| inositol-1-monophosphatase | EEJ33_04885 | Not Available | - | 1017066 - 1017869 | 29118.0 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | EEJ33_04890 | Not Available | + | 1018048 - 1018782 | 27107.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


